Publications
- Bold = lab members.
- * = equal first author contribution.
- † = equal senior author contribution.
- (A) = alphabetical author order.
- = peer-reviewed.
- = invited.
- = book/chapter.
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In-press and preprints
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ScalpelSig: Automated Design of Genomic Panels to Expand Clinical Access to Mutational Signature AnalysisN Franzese, J Fan, R Sharan, MDM LeisersonRECOMB (2021; to appear)
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S Sinha, KB Guerra, K Cheng, MDM Leiserson, DM Wilson, BM Ryan, Z Ronai, JS Lee, AJ Deshpande, E Ruppin.bioRxiv (2018)
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2020
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J Fan, XC Li, M Crovella, MDM LeisersonECCB/Bioinformatics (2020)
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YA Kim, D Wojtowicz, R Sarto Basso, I Sason, W Robinson, DS Hochbaum, MDM Leiserson, R Sharan, F Vandin, TM PryzytckaGenome Medicine (2020)
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I Sason, Y Chen, MDM Leiserson, R Sharan.RECOMB (2020)
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MDM Leiserson†, T Przytycka†, R Sharan†PSB (2020)
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D Wojtowicz, MDM Leiserson, R Sharan, T PrzytyckaPSB (2020)
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PhySigs: Phylogenetic Inference of Mutational Signature DynamicsS Christensen, MDM Leiserson, M El-KebirPSB (2020)
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2019
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X Huang*, I Sason*, D Wojtowicz*, Y-A Kim, MDM Leiserson†, Teresa M Przytycka†, Roded Sharan†Genome Medicine (2019)
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W Robinson, R Sharan, MDM LeisersonISMB/Bioinformatics (2019)
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I Sason, D Wojtowicz, W Robinson, MDM Leiserson, T Przytycka, R SharanRECOMB (2019)
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J Fan, A Cannistra, I Fried, T Lim, T Schaffner, M Crovella, B Hescott†, MDM Leiserson†.Nucleic Acids Research (2019). Also oral presentation at RECOMB (2018)
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N Swinger, M De-Arteaga, NT Heffernan IV, MDM Leiserson, AT Kalai.AIES (2019)
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2018
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MDM Leiserson, V Syrgkanis, A Gilson, M Dudik, S Gillett, J Chayes, C Borgs, DF Bajorin, J Rosenberg, S Funt, A Snyder, L Mackey.PLoS ONE (2018)
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E Persi, YI Wolf, MDM Leiserson, EV Koonin, E Ruppin.Proceedings of the National Academy of Sciences (2018)
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M Reyna, MDM Leiserson, BJ Raphael.Bioinformatics/ECCB (2018)
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C Grasso, M Giannakis, DK Wells, T Hamada, XJ Mu, et al.Cancer Discovery (2018)
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M Radovich, CR Pickering, I Felau, G Ha, H Zhang, et al.Cancer Cell (2018)
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C Dwork, N Immorlica, A Kalai, MDM Leiserson (A).Proceedings of the 1st Conference on Fairness, Accountability and Transparency (2018)
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2017
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The Cancer Genome Atlas Research NetworkCancer Cell (2017)
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D Senft, MDM Leiserson, E Ruppin, ZA RonaiTrends in Molecular Medicine (2017)
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2016
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MDM Leiserson, MA Reyna, BJ Raphael.Bioinformatics/ISMB (2016)
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2015
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C Lu*, M Xie*, MC Wendl*, J Wang*, MD McLellan*, MDM Leiserson*, K Huang, MA Wyczalkowski, R Jayasinghe, T Banerjee, J Ning, P Tripathi, Q Zhang, B Niu, K Ye, HK Schmidt, RS Fulton, JF McMichael, P Batra, C Kandoth, M Bharadwaj, DC Koboldt, CA Miller, KL Kanchi, JM Eldred, DE Larson, JS Welch, M You, BA Ozenberger, R Govindan, MJ Walter, MJ Ellis, ER Mardis, TA Graubert, JF Dipersio, TJ Ley, RK Wilson, PJ Goodfellow, BJ Raphael, F Chen, KJ Johnson, JD Parvin, L DingNature Communications (2015)
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The Cancer Genome Atlas Research NetworkNew England Journal of Medicine (2015)
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MDM Leiserson, BJ RaphaelCambridge University Press (eds: G.C. Teng, D. Ghosh, X.J. Zhou) (2015) [Book chapter]
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MDM. Leiserson*, HT Wu*, F Vandin, BJ RaphaelGenome Biology (2015)
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MDM Leiserson, CC Gramazio, J Hu, HT Wu, DH Laidlaw, BJ RaphaelNature Methods (2015)
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MDM Leiserson*, F Vandin*, HT Wu, JR Dobson, JV Eldridge, JL Thomas, A Papoutsaki, Y Kim, B Niu, M McLellan, MS Lawrence, A Gonzalez-Perez, D Tamborero, Y Cheng, GA Ryslik, N Lopez-Bigas, G Getz, L Ding, BJ RaphaelNature Genetics (2015)
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2014
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KA Hoadley, C Yau, DM Wolf, AD Cherniack, D Tamborero, S Ng, MDM Leiserson, B Niu, MD McLellan, V Uzunangelov, J Zhang, C Kandoth, R Akbani, H Shen, L Omberg, A Chu, AA Margolin, LJ van’t Veer, N Lopez-Bigas, PW Laird, BJ Raphael, L Ding, AG Robertson, LA Byers, GB Mills, JN Weinstein, C Van Waes, Z Chen, EA Collisson, TCGA Research Network, CC Benze, CM Peroue, JM StuartCell (2014)
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The Cancer Genome Atlas Research NetworkNature (2014)
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KL Kanchi, KJ Johnson, C Lu, MD McLellan, MDM Leiserson, MC Wendl, Q Zhang, DC Koboldt, M Xie, C Kandoth, JF McMichael, MA Wyczalkowski, DE Larson, HK Schmidt, CA Miller, RS Fulton, PT Spellman, ER Mardis, TE Druley, TA Graubert, PJ Goodfellow, BJ Raphael, R K Wilson, L DingNature Communications (2014)
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2013
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MDM Leiserson, JV Eldridge, S Ramachandran, BJ RaphaelCurrent Opinion in Genetics & Development (2013)
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C Kandoth, MD McLellan, F Vandin, K Ye, B Niu, C Lu, M Xie, Q Zhang, JF McMichael, MA Wyczalkowski, MDM Leiserson, CA Miller, JS Welch, MJ Walter, MC Wendl, TJ Ley, RK Wilson, BJ Raphael, L DingNature (2013)
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The Cancer Genome Atlas Research Network, JN Weinstein, EA Collisson, GB Mills, KR Mills Shaw, BA Ozenberger, K Ellrott, I Shmulevich, C Sander, JM StuartNature Genetics (2013)
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MDM Leiserson, D Blokh, R Sharan†, BJ Raphael†PLoS Computational Biology (2013)
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The Cancer Genome Atlas Research NetworkNew England Journal of Medicine (2013)
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A Gallant, MDM Leiserson, M Kachalov, L Cowen, B HescottBMC Bioinformatics (2013)
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2011
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MDM Leiserson, D Tatar, L Cowen, B HescottJournal of Computational Biology/RECOMB (2011)
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2009
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B Hescott, MDM Leiserson, D Slonim, L CowenJournal of Computational Biology/RECOMB (2009)